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The Journal of Horticultural Science & Biotechnology

Vol. 85 No: 2

Title:
Structural and functional analyses of two new S-RNase alleles, Ssi5 and Sad5, in apple

Authors:
S. MATSUMOTO, K. YAMADA, K. SHIRATAKE, K. OKADA and K. ABE

pp: 131-136

Abstract:
We determined the genomic DNA sequences of two new S-RNase alleles, Ssi5 and Sad5, in apple. Both consisted of 232 deduced amino acids, and contained five conserved domains (C1, C2, C3, RC4, and C5), and an intron specific to S-RNase genes of the Rosaceae, at the appropriate positions.We developed a PCR-RFLP method to identify these alleles, and clarified their occurrence in several Malus species, such as M. orientalis (W1-11-13; ID number 90104; Ssi5), M. sieversii (W1-10-49; ID number 90100; Ssi5), and M. sylvestris (ID number 88076; Sad5) and cultivars, such as ‘Adersleber Calville’ (Sad5) and ‘Cox’s Pomona’ (Sad5). Cross-pollination tests confirmed that Ssi5 and Sad5 were functionally distinct in spite of their identical rosaceous hypervariable region (RHV), which appears to be critical for S-allele discrimination in the Rosaceae. We recommend use of the next available numbers, S33 and S34, instead of Ssi5 and Sad5, respectively, since the allele annotations are only transitory. This is the first known case in apple in which two S-RNase alleles containing an identical RHV act as different alleles.

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